Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015797953.1_cds_XP_016457523.1_5087
CDS Infomation

[gene=LOC107781343] [db_xref=GeneID:107781343] [protein=diphthamide biosynthesis protein 2-like] [protein_id=XP_016457523.1] [location=complement(join(8935..9176,9677..9813,11205..11311,11396..11511,11641..11708,11826..11895,12564..12903,14391..14499,14598..14821,15677..15757))] [gbkey=CDS]
Sequence

ATGGAATTGGAGTCAATTTACGAAACTGATCGTGTCGCCGGATTCATCTCCGGTAGAGGC
TTCCGCCGAGTTGCTCTTCAGTTCCCTGATGAACTATTGAAAGATTCAACGAGGATAGTT
GCTGCACTACATGAAAAACTTCGCTCGTTCAACCAGTTACATACTGGAAGTAATGGAGAT
GCAAAGGATGTTAGGCTGTATGTAATGGCGGATACTACGTATGGAAATTGCTGTGTCGAT
GAAGTTGGAGCATCTCATGTTAATGCGGACTGCGTTATCCATTATGGCCATACTTGCTTC
AGTCCGACATCAACTCTTCCCGCATTTTTTGTCCTTGGGAAAGCTTCACTAAATGTGCCA
CTTTGTGCTCAAAAGCTTTGCGAGTATACAATAAAAGCTGGCAAACCTATTTTGGTTCTT
TATGGACTTGAATATGCACATGCAATCACAGAAATCAAAGCATCAGTTGGTACTCAATCA
TGCTTCAAACTGGAAATTTGTTATGCTGATACTATATCTCCAGTTATAACTCCATCAGAA
ACTTTTAGCTCGATGAATGGGCAACCAGAACTAATTGATGGTCAATGTGCAAATGGCTGT
ACTCCTGAGGAGAACAATGCACCATATCGTATTGGAGGGTTGACGTGGTCGTTACCTGTG
GGACACAGGATGGAGGACTATTTGCTTTTCTATGTTGGTTCAGATGACTCAGCCTTTGCA
AATATATTAATGACATACAATACTTGTGAAATAGTCAGATATGATGCTACTGAAGATCTT
TTGGTGAATGATTTTTCTCAGCAGAAAAGGATTCTTAAGCGTAGGTACTTTCTTATTGAG
AAAGCAAAGGATGCTAGCATCATAGGGATCTTGGTAGGAACACTTGGAGTAGCTGGTTAC
CTCCACATGATTCATCAGATGAAAGACTTGATTATCCAAGCTGGGAAGAAAGCCTATACT
TTTGTTATGGGGAGACCTAACCCTGCAAAACTTGCCAACTTTCCCGAGTGCGATGTCTTC
ATTTATGTTTCTTGTGCACAAACTGCTCTATTGGATAGTAAAGAGTTCTTAGCTCCAGTT
ATTACTCCTTTTGAAGCAATGATTGCTTTCGGCAGAGGAAGCGAATGGACTGGGGCTTAT
GTGACAGAATTTCGGGATTTGATTACTTCTTCCCCCATGGAAGTGAAAGACCGGTCAGAA
GCGCGGTTTTCTTTCATTCAGGGTGGATATGTGGAAGATTTTGAGCAGCAAGATGTTGAA
GAAGATGTCGAAGATGGAGTTTCTGCTTTAGTGAACATCACAGAGAAGGCTCTGCGTGTT
CGTGACAAGGACTCTCAAACTCTAATGAATGGAACAGCTAAATCTGGGGCAGAGTACTTT
GCAGCTAGGTCGTTTCACGGCCTTGACATTCATACTGAAAATAATTTTCCCGAGCCATTC
TTAATTGGTAAAAGTGGGAGAGCATCAGGGTACAAGAATGAGACGACAGAATAA

Peptide Sequence

PEP ID

XP_016457523.1
PEP Infomation

PREDICTED: diphthamide biosynthesis protein 2-like [Nicotiana tabacum]
Sequence

MELESIYETDRVAGFISGRGFRRVALQFPDELLKDSTRIVAALHEKLRSFNQLHTGSNGD
AKDVRLYVMADTTYGNCCVDEVGASHVNADCVIHYGHTCFSPTSTLPAFFVLGKASLNVP
LCAQKLCEYTIKAGKPILVLYGLEYAHAITEIKASVGTQSCFKLEICYADTISPVITPSE
TFSSMNGQPELIDGQCANGCTPEENNAPYRIGGLTWSLPVGHRMEDYLLFYVGSDDSAFA
NILMTYNTCEIVRYDATEDLLVNDFSQQKRILKRRYFLIEKAKDASIIGILVGTLGVAGY
LHMIHQMKDLIIQAGKKAYTFVMGRPNPAKLANFPECDVFIYVSCAQTALLDSKEFLAPV
ITPFEAMIAFGRGSEWTGAYVTEFRDLITSSPMEVKDRSEARFSFIQGGYVEDFEQQDVE
EDVEDGVSALVNITEKALRVRDKDSQTLMNGTAKSGAEYFAARSFHGLDIHTENNFPEPF
LIGKSGRASGYKNETTE

Transcript Sequence

Gene sequence data has not been registered.